selected publications
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academic article
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Gene co-expression networks from RNA sequencing of dairy cattle identifies genes and pathways affecting feed efficiency.
BMC Bioinformatics.
19.
2018
Gene co-expression networks in liver and muscle transcriptome reveal sex-specific gene expression in lambs fed with a mix of essential oils.
BMC Genomics.
19.
2018
Identification of Expression QTLs Targeting Candidate Genes for Residual Feed Intake in Dairy Cattle Using Systems Genomics.
Journal of Genetics and Genome Research.
5.
2018
A viral metagenomic approach on a non-metagenomic experiment: Mining next generation sequencing datasets from pig DNA identified several porcine parvoviruses for a retrospective evaluation of viral infections.
PLoS ONE.
12.
2017
Application of integrative genomics and systems biology to conventional and in vitro reproductive traits in cattle.
Animal Reproduction.
14.
2017
Basic and practical aspects of pregnancy establishment in cattle.
Animal Reproduction.
14.
2017
Genomic study and Medical Subject Headings enrichment analysis of early pregnancy rate and antral follicle numbers in Nelore heifers,.
Journal of Animal Science.
95.
2017
Identification of potential biomarkers in donor cows for in vitro embryo production by granulosa cell transcriptomics.
PLoS ONE.
12.
2017
In vitro production of bovine embryos: cumulus/granulosa cell gene expression patterns point to early atresia as beneficial for oocyte competence.
Animal Reproduction.
14.
2017
RNA-Seq transcriptomics and pathway analyses reveal potential regulatory genes and molecular mechanisms in high- and low-residual feed intake in Nordic dairy cattle.
BMC Genomics.
18.
2017
Systematic in vitro and in vivo characterization of Leukemia‐inhibiting factor‐ and Fibroblast growth factor‐derived porcine induced pluripotent stem cells.
Molecular Reproduction and Development.
84.
2017
Potential role of lncRNA cyp2c91–protein interactions on diseases of the immune system.
Frontiers in Genetics.
6.
2015
Systems Genetics of Complex Diseases Using RNA-Sequencing Methods.
International Journal of Bioscience Biochemistry and Bioinformatics.
5.
2015
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chapter
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dataset
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Table_1_Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle.XLSX.
frontiers.
2019
Table_2_Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle.XLSX.
frontiers.
2019
Table_3_Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle.XLSX.
frontiers.
2019
Table_4_Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle.XLSX.
frontiers.
2019
Table_5_Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle.XLSX.
frontiers.
2019
Table_6_Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle.XLSX.
frontiers.
2019
Additional file 1: of Gene co-expression networks in liver and muscle transcriptome reveal sex-specific gene expression in lambs fed with a mix of essential oils.
springer-nature.
2018
Additional file 2: of Gene co-expression networks in liver and muscle transcriptome reveal sex-specific gene expression in lambs fed with a mix of essential oils.
springer-nature.
2018
Additional file 3: of Gene co-expression networks in liver and muscle transcriptome reveal sex-specific gene expression in lambs fed with a mix of essential oils.
springer-nature.
2018
Additional file 4: of Gene co-expression networks in liver and muscle transcriptome reveal sex-specific gene expression in lambs fed with a mix of essential oils.
springer-nature.
2018
Additional file 5: of Gene co-expression networks in liver and muscle transcriptome reveal sex-specific gene expression in lambs fed with a mix of essential oils.
springer-nature.
2018
Additional file 6: of Gene co-expression networks in liver and muscle transcriptome reveal sex-specific gene expression in lambs fed with a mix of essential oils.
springer-nature.
2018
Additional file 7: of Gene co-expression networks in liver and muscle transcriptome reveal sex-specific gene expression in lambs fed with a mix of essential oils.
springer-nature.
2018
A viral metagenomic approach on a non-metagenomic experiment: Mining next generation sequencing datasets from pig DNA identified several porcine parvoviruses for a retrospective evaluation of viral infections.
public-library-of-science.
2017
Comparison of FCs of significant associated genes with expression changes identified between healthy and small atretic follicles..
public-library-of-science.
2017
Comparison of FCs of significant genes with expression changes identified between small and medium or large antral follicles..
public-library-of-science.
2017
Identification of potential biomarkers in donor cows for in vitro embryo production by granulosa cell transcriptomics.
public-library-of-science.
2017
Molecular and cellular functions enriched in IPA®..
public-library-of-science.
2017
PCR primers and PCR conditions of the amplified fragments of the detected viruses..
public-library-of-science.
2017
Significant enriched KEGG pathways (FDR <5%) identified from GSEA for all the IVP scores analysed..
public-library-of-science.
2017
Summary of the Fold Change (FC) and the corresponding FDR for the genes in common among all the IVP scores..
public-library-of-science.
2017
Summary of the IVP scores for the sample sets..
public-library-of-science.
2017
Summary of the Ion Torrent reads utilized for the detection of viral genomes..
public-library-of-science.
2017
Summary of the viruses identified in the two next generation sequencing datasets (LibP and LibN)..
public-library-of-science.
2017