selected publications
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academic article
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Agriculture shapes the trophic niche of a bat preying on multiple pest arthropods across Europe: Evidence from DNA metabarcoding.
Molecular Ecology.
27.
2018
Ancient genomes from Iceland reveal the making of a human population.
Science.
360.
2018
Applied Hologenomics: Feasibility and Potential in Aquaculture.
Trends in Biotechnology.
36.
2018
Bat Biology, Genomes, and the Bat1K Project: To Generate Chromosome-Level Genomes for all Living Bat Species.
Annual Review of Animal Biosciences.
6.
2018
Debugging diversity – a pan‐continental exploration of the potential of terrestrial blood‐feeding leeches as a vertebrate monitoring tool.
Molecular Ecology Resources.
18.
2018
Earth BioGenome Project: Sequencing life for the future of life.
Proceedings of the National Academy of Sciences of the United States of America.
115.
2018
Greenland sled dogs at risk of extinction.
Science.
360.
2018
Improved Genome Assembly and Annotation for the Rock Pigeon (Columba livia).
G3: Genes, Genomes, Genetics.
8.
2018
Mind the gut: genomic insights to population divergence and gut microbial composition of two marine keystone species.
Microbiome.
6.
2018
No longer locally extinct? Tracing the origins of a lion (Panthera leo) living in Gabon.
Conservation Genetics.
19.
2018
Pan-genome Analysis of Ancient and Modern Salmonella enterica Demonstrates Genomic Stability of the Invasive Para C Lineage for Millennia.
Current Biology.
28.
2018
Quantifying Temporal Genomic Erosion in Endangered Species.
Trends in Ecology & Evolution.
33.
2018
Recent Asian origin of chytrid fungi causing global amphibian declines.
Science.
360.
2018
Scrutinizing key steps for reliable metabarcoding of environmental samples.
Methods in Ecology and Evolution.
9.
2018
Single‐tube library preparation for degraded DNA.
Methods in Ecology and Evolution.
9.
2018
Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure.
Molecular Ecology Resources.
18.
2018
Whole-Genome Sequencing of African Dogs Provides Insights into Adaptations against Tropical Parasites..
Molecular Biology and Evolution.
35.
2018
An expanded mammal mitogenome dataset from Southeast Asia.
GigaScience.
6.
2017
An ‛Aukward’ Tale: A Genetic Approach to Discover the Whereabouts of the Last Great Auks.
Genes.
8.
2017
Characterizing restriction enzyme‐associated loci in historic ragweed (Ambrosia artemisiifolia) voucher specimens using custom‐designed RNA probes.
Molecular Ecology Resources.
17.
2017
Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing.
GigaScience.
6.
2017
Connecting Earth observation to high-throughput biodiversity data.
Nature Ecology & Evolution.
1.
2017
Documenting DNA in the dust.
Molecular Ecology.
26.
2017
Eggshell palaeogenomics: Palaeognath evolutionary history revealed through ancient nuclear and mitochondrial DNA from Madagascan elephant bird (Aepyornis sp.) eggshell.
Molecular Phylogenetics and Evolution.
109.
2017
Evolutionary History of Saber-Toothed Cats Based on Ancient Mitogenomics.
Current Biology.
27.
2017
Functional roles of Aves class-specific cis-regulatory elements on macroevolution of bird-specific features.
Nature Communications.
8.
2017
Genome-wide Ancestry and Demographic History of African-Descendant Maroon Communities from French Guiana and Suriname.
American Journal of Human Genetics.
101.
2017
Molecular clocks indicate turnover and diversification of modern coleoid cephalopods during the Mesozoic Marine Revolution.
Proceedings of the Royal Society B.
284.
2017
Natural selection shaped the rise and fall of passenger pigeon genomic diversity.
Science.
358.
2017
Relative performance of two DNA extraction and library preparation methods on archaeological human teeth samples.
STAR Science & Technology of Archaeological Research.
3.
2017
The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics.
BMC Genomics.
18.
2017
Do Vertebrate Gut Metagenomes Confer Rapid Ecological Adaptation?.
Trends in Ecology & Evolution.
31.
2016
Genome Sequence of a 5,310-Year-Old Maize Cob Provides Insights into the Early Stages of Maize Domestication.
Current Biology.
26.
2016
Grape and wine culture in Georgia, the South Caucasus.
BIO Web of Conferences.
7.
2016
Mitochondrial DNA from the eradicated European Plasmodium vivax and P. falciparum from 70-year-old slides from the Ebro Delta in Spain.
Proceedings of the National Academy of Sciences of the United States of America.
113.
2016
The Draft Genome of Extinct European Aurochs and its Implications for De-Extinction.
Open Quaternary.
2.
2016
The limits and potential of paleogenomic techniques for reconstructing grapevine domestication.
Journal of Archaeological Science.
72.
2016
The potential and pitfalls of de‐extinction.
Zoologica Scripta.
45.
2016
Direct evidence of milk consumption from ancient human dental calculus.
Scientific Reports.
4.
2015
Speciation and demographic history of Atlantic eels (Anguilla anguilla and A. rostrata) revealed by mitogenome sequencing.
Heredity.
113.
2014
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dataset
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Excel sheet.
dryad.
2018
Mitochondrial DNA FASTA file.
dryad.
2018
NEXUS tree.
dryad.
2018
NEXUS tree.
dryad.
2018
NJ tree in Figure 2b.
dryad.
2018
Nexus file.
dryad.
2018
PSinfo_vampire_16s.
dryad.
2018
PSinfo_vampire_Leray.
dryad.
2018
Plink (bed) file.
dryad.
2018
Plink file (bim).
dryad.
2018
Plink file (fam).
dryad.
2018
RAW_SPECIES_SUM.
dryad.
2018
TOG-HUHC-Vamps-16s-3_S10_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-16s-3_S10_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-16s-4_S11_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-16s-4_S11_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-16s-5_S12_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-16s-5_S12_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-16s-6_S13_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-16s-6_S13_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-16s-7_S14_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-16s-7_S14_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-16s-8_S15_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-16s-8_S15_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray1_S1_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray1_S1_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray2_S2_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray2_S2_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray3_S3_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray3_S3_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray4_S4_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray4_S4_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray5_S5_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray5_S5_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray6_S6_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray6_S6_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray7_S7_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray7_S7_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray8_S8_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray8_S8_L001_R2_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray9_S9_L001_R1_001.fastq.
dryad.
2018
TOG-HUHC-Vamps-Leray9_S9_L001_R2_001.fastq.
dryad.
2018
Vamps-16s-1_S5_L001_R1_001.fastq.
dryad.
2018
Vamps-16s-1_S5_L001_R2_001.fastq.
dryad.
2018
Vamps-16s-2_S6_L001_R1_001.fastq.
dryad.
2018
Vamps-16s-2_S6_L001_R2_001.fastq.
dryad.
2018
Vamps-16s-9_S7_L001_R1_001.fastq.
dryad.
2018
Vamps-16s-9_S7_L001_R2_001.fastq.
dryad.
2018
Epp sequences.
dryad.
2017
FASTQ.
dryad.
2017
MCMCTree_inputs.
dryad.
2017
MrBayes_inputs.
dryad.
2017
Nuclear_sequence_alignments.
dryad.
2017
RaxML_inputs.
dryad.
2017
Zeale sequences.
dryad.
2017
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hide from search
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Boreal_sequence_data.
dryad.
2012
Temperate_sequence_data.
dryad.
2012
Temperate_sequence_data_filtered.
dryad.
2012
Tropical_sequence_data.
dryad.
2012
Yoccoz_et_al_Table_S1.
dryad.
2012
Yoccoz_et_al_Table_S2.
dryad.
2012
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preprint