selected publications
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academic article
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Lateral Distribution and Mobility of Transmembrane Proteins in Plasma Membrane Vesicles.
Biophysical Journal.
114.
2018
Quantification of Loading and Laser-Assisted Release of RNA from Single Gold Nanoparticles..
Langmuir.
34.
2018
In silico Evolution of Lysis-Lysogeny Strategies Reproduces Observed Lysogeny Propensities in Temperate Bacteriophages.
Frontiers in Microbiology.
8.
2017
Prophages and Growth Dynamics Confound Experimental Results with Antibiotic-Tolerant Persister Cells.
mBio.
8.
2017
Synchronized switching of multiple toxin–antitoxin modules by (p)ppGpp fluctuation.
Nucleic Acids Research.
45.
2017
Asymmetric Damage Segregation Constitutes an Emergent Population-Level Stress Response.
Cell Systems.
3.
2016
Dynamics of Membrane Tubes Formed by I-BARS.
Biophysical Journal.
110.
2016
Dynamics of membrane nanotubes coated with I-BAR.
Scientific Reports.
6.
2016
Pumping persisters.
Nature.
534.
2016
The transcriptional regulator GalR self-assembles to form highly regular tubular structures.
Scientific Reports.
6.
2016
A 3′ External Transcribed Spacer in a tRNA Transcript Acts as a Sponge for Small RNAs to Prevent Transcriptional Noise.
Molecular Cell.
58.
2015
Coupled Positive and Negative Feedbacks Produce Diverse Gene Expression Patterns in Colonies.
mBio.
6.
2015
Dynamic competition between transcription initiation and repression: Role of nonequilibrium steps in cell-to-cell heterogeneity.
Physical Review E.
92.
2015
Effects of Four Different Regulatory Mechanisms on the Dynamics of Gene Regulatory Cascades.
Scientific Reports.
5.
2015
How long can bacteriophage λ change its mind?.
Bacteriophage.
5.
2015
Mismatch repair at stop codons is directed independent of GATC methylation on the Escherichia coli chromosome.
Scientific Reports.
4.
2015
Restriction modification systems as engines of diversity.
Frontiers in Microbiology.
6.
2015
The role of mRNA and protein stability in the function of coupled positive and negative feedback systems in eukaryotic cells.
Scientific Reports.
5.
2015
Vesicle Fusion Triggered by Optically Heated Gold Nanoparticles..
Nano Letters.
15.
2015
A Mixed Incoherent Feed-Forward Loop Allows Conditional Regulation of Response Dynamics.
PLoS ONE.
9.
2014
Commitment to Lysogeny Is Preceded by a Prolonged Period of Sensitivity to the Late Lytic Regulator Q in Bacteriophage λ.
Journal of Bacteriology.
196.
2014
Mutations in Transcriptional Regulators Allow Selective Engineering of Signal Integration Logic.
mBio.
5.
2014
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conference paper
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Controlled cellular fusion using optically trapped plasmonic nano-heaters.
Proceedings of SPIE.
2016
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dataset
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hide from search
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Average number of cells which are affected by more than 5 due to a single cell mutation of either a silenced to active cell, or an active to silenced cell, mean (standard deviation) in lattices with dimensions of 90×90 cells..
public-library-of-science.
2013
Behavioral transitions which have at least 0.5 higher transition rates in the full term group..
public-library-of-science.
2013
Behavioral transitions which have at least 0.5 higher transition rates in the preterm group..
public-library-of-science.
2013
Characteristics of behavioral transitions..
public-library-of-science.
2013
Structural features of the preterm and full-term interaction networks..
public-library-of-science.
2013
The most frequent behavioral transitions in the full term group identified by network analysis (Figure 2, top panel)..
public-library-of-science.
2013
The most frequent behavioral transitions in the preterm group identified by network analysis (Figure 2, middle panel)..
public-library-of-science.
2013
A Novel Complex: A Quantum Dot Conjugated to an Active T7 RNA Polymerase.
Journal of Nanomaterials.
2013
Comparative Network Analysis of Preterm vs. Full-Term Infant-Mother Interactions.
PLoS ONE.
2013
Regulatory Genes
2013
The effect of LacI autoregulation on the performance of the lactose utilization system in Escherichia coli.
Nucleic Acids Research.
2013
Genome-Wide Screening of Genes Regulated by DNA Methylation in Colon Cancer Development.
public-library-of-science.
2012
Dynamics of Uptake and Metabolism of Small Molecules in Cellular Response Systems.
public-library-of-science.
2009
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preprint