selected publications
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academic article
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Ancient genomes revisit the ancestry of domestic and Przewalski’s horses.
Science.
360.
2018
Convergent genomic signatures of domestication in sheep and goats.
Nature Communications.
9.
2018
Detecting Signatures of Positive Selection along Defined Branches of a Population Tree Using LSD.
Molecular Biology and Evolution.
35.
2018
Improved de novo genomic assembly for the domestic donkey.
Science Advances.
4.
2018
The high-quality genome sequence of the oceanic island endemic species Drosophila guanche reveals signals of adaptive evolution in genes related to flight and genome stability.
Genome Biology and Evolution.
10.
2018
Ancient genomic changes associated with domestication of the horse.
Science.
356.
2017
DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets..
Molecular Biology and Evolution.
34.
2017
Evolutionary Patterns and Processes: Lessons from Ancient DNA.
Systematic Biology.
66.
2017
Experimental conditions improving in‐solution target enrichment for ancient DNA.
Molecular Ecology Resources.
17.
2017
Genome of the pitcher plant Cephalotus reveals genetic changes associated with carnivory.
Nature Ecology & Evolution.
1.
2017
Rapid Functional and Sequence Differentiation of a Tandemly Repeated Species-Specific Multigene Family in Drosophila.
Molecular Biology and Evolution.
34.
2017
Evolutionary Patterns and Processes: Lessons from Ancient DNA.
Systematic Biology.
2016
The Evolutionary Origin and Genetic Makeup of Domestic Horses..
Genetics.
204.
2016
Assessing Associations between the AURKA-HMMR-TPX2-TUBG1 Functional Module and Breast Cancer Risk in BRCA1/2 Mutation Carriers.
PLoS ONE.
10.
2015
Evolutionary Genomics and Conservation of the Endangered Przewalski’s Horse.
Current Biology.
25.
2015
Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments.
Proceedings of the National Academy of Sciences of the United States of America.
112.
2015
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dataset
-
ALL.0.0.treemix.gz.
dryad.
2018
ALL.beagle.
dryad.
2018
ALL.beagle.gprobs.maf0.
dryad.
2018
ALL_maxmiss3.TransversionOnly.beagle.
dryad.
2018
ALL_maxmiss3.TransversionOnly.noCAGT.beagle.
dryad.
2018
chry_All.1.fasta.reduced.
dryad.
2018
chry_AllNoOut.1.fasta.
dryad.
2018
BadiRate_analysis.
dryad.
2017
GO_annotation.
dryad.
2017
convergence_detection.
dryad.
2017
gene_model.
dryad.
2017
genome_sequence.
dryad.
2017
maximum_likelihood_phylogeny.
dryad.
2017
orthoMCL_analysis.
dryad.
2017
protein_structure.
dryad.
2017
transcriptome_comparison.
dryad.
2017
Assessing Associations between the AURKA-HMMR-TPX2-TUBG1 Functional Module and Breast Cancer Risk in BRCA1/2 Mutation Carriers.
public-library-of-science.
2015
Potential GxG associated with breast cancer risk in BRCA1/2 mutation carriers..
public-library-of-science.
2015